Installing
Note
We are assuming you have a working mamba installation in your computer.
If this is not the case, please refer to their official documentation.
If you installed mamba into an existing conda installation, also make sure that the conda-forge channel is configured by running conda config --add channels conda-forge.
Install from the conda package
Create a new conda environment called
kissimwith thekissimpackage and all its dependencies installed:mamba create -n kissim kissim
Activate the new conda environment:
conda activate kissim
Test that your installation works:
kissim -h
Install from the latest development snapshot
Install the latest development snapshot from the GitHub repository’s main branch.
Create a new conda environment called
kissim:mamba env create -f https://raw.githubusercontent.com/volkamerlab/kissim/main/devtools/conda-envs/test_env.yaml -n kissim
Activate the new conda environment:
conda activate kissim
Install
kissimpackage via pip:pip install https://github.com/volkamerlab/kissim/archive/main.tar.gz
Test that your installation works:
kissim -h